Cluster: Rep_2080_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2080
- CGC Family ID: CGCFAM_00865
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2080_c_24 | Rep_2080_c_24_412 | 384181 | 386022 | - | 3.A.6.1.1 |
| STP | Rep_2080_c_24 | Rep_2080_c_24_413 | 386218 | 387534 | - | AAA |
| CAZyme | Rep_2080_c_24 | Rep_2080_c_24_414 | 387548 | 388114 | - | CE4 |
| NULL(UNKNOWN) | Rep_2080_c_24 | Rep_2080_c_24_415 | 388074 | 388340 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2080_c_24 | Rep_2080_c_24_416 | 388481 | 390181 | - | GH3 |
Gene ID: Rep_2080_c_24_412
Type: TC
Location: 384181 - 386022 (-)
Type: TC
Location: 384181 - 386022 (-)
Gene ID: Rep_2080_c_24_413
Type: STP
Location: 386218 - 387534 (-)
Type: STP
Location: 386218 - 387534 (-)
Gene ID: Rep_2080_c_24_414
Type: CAZyme
Location: 387548 - 388114 (-)
Type: CAZyme
Location: 387548 - 388114 (-)
Gene ID: Rep_2080_c_24_415
Type:
Location: 388074 - 388340 (-)
Type:
Location: 388074 - 388340 (-)
Gene ID: Rep_2080_c_24_416
Type: CAZyme
Location: 388481 - 390181 (-)
Type: CAZyme
Location: 388481 - 390181 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3402
Species
UBA3402 sp003478355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.