Cluster: Rep_2080_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2080
- CGC Family ID: CGCFAM_02606
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2080_c_18 | Rep_2080_c_18_27 | 17799 | 18344 | - | PL12 |
| pfam | Rep_2080_c_18 | Rep_2080_c_18_28 | 18414 | 18947 | - | Hepar_II_III_N |
| pfam | Rep_2080_c_18 | Rep_2080_c_18_29 | 19230 | 19538 | - | Hepar_II_III_N |
| TC | Rep_2080_c_18 | Rep_2080_c_18_30 | 19623 | 20537 | - | 3.A.1.1.10 |
| TC | Rep_2080_c_18 | Rep_2080_c_18_31 | 20503 | 21228 | - | 3.A.1.1.29 |
Gene ID: Rep_2080_c_18_27
Type: CAZyme
Location: 17799 - 18344 (-)
Type: CAZyme
Location: 17799 - 18344 (-)
Gene ID: Rep_2080_c_18_28
Type: pfam
Location: 18414 - 18947 (-)
Type: pfam
Location: 18414 - 18947 (-)
Gene ID: Rep_2080_c_18_29
Type: pfam
Location: 19230 - 19538 (-)
Type: pfam
Location: 19230 - 19538 (-)
Gene ID: Rep_2080_c_18_30
Type: TC
Location: 19623 - 20537 (-)
Type: TC
Location: 19623 - 20537 (-)
Gene ID: Rep_2080_c_18_31
Type: TC
Location: 20503 - 21228 (-)
Type: TC
Location: 20503 - 21228 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3402
Species
UBA3402 sp003478355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.