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Cluster: Rep_2080_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2080_c_26 Rep_2080_c_26_210 200800 201627 + GH3
NULL(UNKNOWN) Rep_2080_c_26 Rep_2080_c_26_211 201654 202337 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2080_c_26 Rep_2080_c_26_212 202307 202834 + 2.A.2.3.1
pfam Rep_2080_c_26 Rep_2080_c_26_213 202992 203834 + MFS_2
CAZyme Rep_2080_c_26 Rep_2080_c_26_214 203934 205061 - GH105
TC Rep_2080_c_26 Rep_2080_c_26_215 205391 206773 + 3.A.1.1.11
NULL(UNKNOWN) Rep_2080_c_26 Rep_2080_c_26_216 206888 207220 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2080_c_26 Rep_2080_c_26_217 207257 208159 + 3.A.1.1.11
TC Rep_2080_c_26 Rep_2080_c_26_218 208166 209017 + 3.A.1.1.11
CAZyme Rep_2080_c_26 Rep_2080_c_26_219 209149 210702 + GH28
Gene ID: Rep_2080_c_26_210
Type: CAZyme
Location: 200800 - 201627 (+)
Gene ID: Rep_2080_c_26_211
Type:
Location: 201654 - 202337 (+)
Gene ID: Rep_2080_c_26_212
Type: TC
Location: 202307 - 202834 (+)
Gene ID: Rep_2080_c_26_213
Type: pfam
Location: 202992 - 203834 (+)
Gene ID: Rep_2080_c_26_214
Type: CAZyme
Location: 203934 - 205061 (-)
Gene ID: Rep_2080_c_26_215
Type: TC
Location: 205391 - 206773 (+)
Gene ID: Rep_2080_c_26_216
Type:
Location: 206888 - 207220 (+)
Gene ID: Rep_2080_c_26_217
Type: TC
Location: 207257 - 208159 (+)
Gene ID: Rep_2080_c_26_218
Type: TC
Location: 208166 - 209017 (+)
Gene ID: Rep_2080_c_26_219
Type: CAZyme
Location: 209149 - 210702 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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