Genome Details
Selected Rep_genome_ID: HRGMv2_4519
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger avistercoris
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4519 | 2,507,365 | 96.13% | 0% | South Korea | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4519_CGC21 | CGCFAM_00006 | Yes | 8 | 3 | |
| HRGMv2_4519_CGC26 | CGCFAM_00008 | Yes | 6 | 2 | |
| HRGMv2_4519_CGC1 | CGCFAM_00018 | Yes | 9 | 2 | |
| HRGMv2_4519_CGC11 | CGCFAM_00056 | Yes | 5 | 1 | |
| HRGMv2_4519_CGC20 | CGCFAM_00098 | Yes | 8 | 6 | |
| HRGMv2_4519_CGC9 | CGCFAM_00122 | Yes | 15 | 5 | |
| HRGMv2_4519_CGC15 | CGCFAM_00342 | Yes | 5 | 2 | |
| HRGMv2_4519_CGC12 | CGCFAM_00381 | Yes | 3 | 1 | |
| HRGMv2_4519_CGC14 | CGCFAM_00679 | Yes | 8 | 1 | |
| HRGMv2_4519_CGC30 | CGCFAM_01316 | Yes | 5 | 3 | |
| HRGMv2_4519_CGC24 | CGCFAM_01317 | Yes | 5 | 1 | |
| HRGMv2_4519_CGC7 | CGCFAM_01323 | Yes | 9 | 2 | |
| HRGMv2_4519_CGC6 | CGCFAM_01366 | Yes | 4 | 1 | |
| HRGMv2_4519_CGC17 | CGCFAM_02254 | Yes | 3 | 1 | |
| HRGMv2_4519_CGC5 | CGCFAM_04416 | Yes | 11 | 7 | |
| HRGMv2_4519_CGC19 | CGCFAM_06193 | Yes | 3 | 1 | |
| HRGMv2_4519_CGC27 | CGCFAM_06770 | Yes | 3 | 1 | |
| HRGMv2_4519_CGC23 | CGCFAM_10628 | Yes | 3 | 1 |
Top CAZyme Families