Cluster: HRGMv2_4519_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4519
- CGC Family ID: CGCFAM_00381
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4519_12 | HRGMv2_4519_12_26 | 30522 | 31469 | + | GT2 |
| pfam | HRGMv2_4519_12 | HRGMv2_4519_12_27 | 31488 | 32819 | + | MatE | MatE |
| TC | HRGMv2_4519_12 | HRGMv2_4519_12_28 | 32874 | 35255 | - | 9.A.8.1.6 |
Gene ID: HRGMv2_4519_12_26
Type: CAZyme
Location: 30522 - 31469 (+)
Type: CAZyme
Location: 30522 - 31469 (+)
Gene ID: HRGMv2_4519_12_27
Type: pfam
Location: 31488 - 32819 (+)
Type: pfam
Location: 31488 - 32819 (+)
Gene ID: HRGMv2_4519_12_28
Type: TC
Location: 32874 - 35255 (-)
Type: TC
Location: 32874 - 35255 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.