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Cluster: HRGMv2_4519_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4519_29 HRGMv2_4519_29_3 1691 3076 + 9.B.18.1.3
CAZyme HRGMv2_4519_29 HRGMv2_4519_29_4 3073 4179 + GT4
pfam HRGMv2_4519_29 HRGMv2_4519_29_5 4176 4769 + Hexapep | Hexapep_2
CAZyme HRGMv2_4519_29 HRGMv2_4519_29_6 4717 5856 + GT4
pfam HRGMv2_4519_29 HRGMv2_4519_29_7 5867 6412 + Hexapep | Hexapep_2
CAZyme HRGMv2_4519_29 HRGMv2_4519_29_8 6440 7717 + GT4
NULL(UNKNOWN) HRGMv2_4519_29 HRGMv2_4519_29_9 7748 8794 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4519_29 HRGMv2_4519_29_10 8784 10250 + 2.A.66.2.23
Gene ID: HRGMv2_4519_29_3
Type: TC
Location: 1691 - 3076 (+)
Gene ID: HRGMv2_4519_29_4
Type: CAZyme
Location: 3073 - 4179 (+)
Gene ID: HRGMv2_4519_29_5
Type: pfam
Location: 4176 - 4769 (+)
Gene ID: HRGMv2_4519_29_6
Type: CAZyme
Location: 4717 - 5856 (+)
Gene ID: HRGMv2_4519_29_7
Type: pfam
Location: 5867 - 6412 (+)
Gene ID: HRGMv2_4519_29_8
Type: CAZyme
Location: 6440 - 7717 (+)
Gene ID: HRGMv2_4519_29_9
Type:
Location: 7748 - 8794 (+)
Gene ID: HRGMv2_4519_29_10
Type: TC
Location: 8784 - 10250 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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