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PROTEIN: HRGMv2_4519_29_9

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4519_29_9.pdb
Genome ID:
HRGMv2_4519
Protein ID:
HRGMv2_4519_29_9

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Detailed structural information will appear here after analysis...

Protein Sequence 
MENVVKQEYH   GIPFLVDVPV   CINIWVRPKC   QKQQFQVLHQ   ARPSILFLIS   DGGRNEKEWK 60
VIRENRKLYD   ERIDWDCTVY   KLYEPNNLGM   YAMGSKSFAQ   VWNVVDRCIW   LEDDVIPSVS 120
FFRYCAELLE   RYKDDLRISL   ICGMNHLGNY   AEASSDYFFS   RQGSIWGFAM   WRRTYEAYDK 180
NFTYSQDPYT   MRLLRQRTRH   NRKFWDRLCG   YAKDDNYDGH   RAGPEFYFEL   SMYAQNQLQI 240
VPRKNMICNM   GATADAAHSD   ELNLLPSGIR   RIFNMQTYEL   EFPLRHPRYV   IPDVAYEKKR 300
NAIMAYNKPW   RACLYWTEST   LLKVRRGYGR   QAAKKILDRI   RRKKRFER 348
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A3P7DV18-F1-model_v4 4 294 25 301 0.608 0.7261
AF-Q4DMC0-F1-model_v4 16 299 66 367 0.5907 0.7607
AF-Q4D3G6-F1-model_v4 16 299 66 367 0.5907 0.7612
AF-A0A0K0ETJ8-F1-model_v4 1 347 7 442 0.589 0.6741
AF-A0A044SGH9-F1-model_v4 13 346 11 421 0.5878 0.6835
AF-Q32EF9-F1-model_v4 17 345 5 295 0.5875 0.6716
AF-A0A3P7Q5X9-F1-model_v4 15 308 35 346 0.5833 0.7003
AF-G5EBG7-F1-model_v4 1 347 31 465 0.5626 0.6579
AF-A0A044SYE9-F1-model_v4 16 317 48 397 0.5624 0.6965
AF-Q8ZQV3-F1-model_v4 16 345 2 291 0.5464 0.6241
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A1Q6IVQ8-F1-model_v4 GT0 11 348 1 336 0.9073 0.9379
AF-A0A0P0LL34-F1-model_v4 GT0 11 348 1 336 0.9058 0.9366
AF-A0A076J0N4-F1-model_v4 GT0 11 348 1 336 0.9036 0.9347
AF-A0A6M4M676-F1-model_v4 GT0 11 348 1 336 0.9031 0.9342
A0A1H1AE61 GT0 10 346 1 337 0.8922 0.9246
QWE08948.1 GT0 13 326 1 303 0.8234 0.897
AF-F5YQA6-F1-model_v4 GT0 15 328 1 306 0.8158 0.8829
AF-A0A6P1KTQ9-F1-model_v4 GT0 16 348 1 303 0.8129 0.8908
AF-B2IZQ8-F1-model_v4 GT0 16 348 1 304 0.8116 0.8872
AF-E6SSX5-F1-model_v4 GT0 12 348 1 317 0.8114 0.8882
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A1B1U5H3 GT13 16 335 5 301 0.7413 0.8314
WBV42548.1 GT13 17 346 13 310 0.6397 0.7186
A0A7U4RQ02 GT2 17 345 3 273 0.6093 0.7177
QSJ15284.1 GT2 17 348 3 297 0.606 0.6873
A0A6G7Y068 GT2 16 345 2 276 0.6054 0.7008
UHG94867.1 GT2 16 345 1 268 0.6037 0.7083
A0A380KPF0 GT2 16 346 1 273 0.6034 0.7032
A0A8U0M0P7 GT2 16 346 1 270 0.6012 0.7072
A0A6H2C003 GT2 15 345 2 283 0.6003 0.6935
A0A1P8KPM4 GT2 15 345 1 266 0.6 0.7092
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2apc-assembly1.cif.gz_A 16 308 1 305 0.5842 0.6972
1fo8-assembly1.cif.gz_A 15 308 1 293 0.5632 0.6616
5ggi-assembly1.cif.gz_A 10 308 35 352 0.5583 0.6955
5vcr-assembly2.cif.gz_B 1 309 15 325 0.5522 0.6297
5vcr-assembly1.cif.gz_A 1 309 15 331 0.5477 0.6309
5ggi-assembly2.cif.gz_B 10 308 192 509 0.4884 0.6949
5ggf-assembly1.cif.gz_A 10 308 192 494 0.4653 0.6554
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q11068-F1-model_v4 16 316 91 449 0.5373 0.702
AF-Q9XGM8-F1-model_v4 2 312 82 410 0.5329 0.6734
AF-D4GU63-F1-model_v4 12 345 12 298 0.5271 0.6132
AF-P26572-F1-model_v4 15 308 103 408 0.5228 0.6956
AF-Q09325-F1-model_v4 15 308 105 410 0.5216 0.6952
AF-P27115-F1-model_v4 15 308 105 410 0.5215 0.6951
AF-P27808-F1-model_v4 15 308 105 410 0.5212 0.6947
AF-Q91X88-F1-model_v4 9 338 264 660 0.4774 0.6601
AF-Q5RCB9-F1-model_v4 9 338 264 660 0.4754 0.6582
AF-Q5EAB6-F1-model_v4 10 329 288 660 0.4715 0.6711
Download Full SwissProt Results