Cluster: HRGMv2_4519_CGC27
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4519
- CGC Family ID: CGCFAM_06770
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4519_48 | HRGMv2_4519_48_1 | 2 | 661 | - | 3.A.1.3.20 |
| TC | HRGMv2_4519_48 | HRGMv2_4519_48_2 | 855 | 2552 | - | 2.A.114.1.3 |
| CAZyme | HRGMv2_4519_48 | HRGMv2_4519_48_3 | 2795 | 4363 | + | GH13_44 |
Gene ID: HRGMv2_4519_48_1
Type: TC
Location: 2 - 661 (-)
Type: TC
Location: 2 - 661 (-)
Gene ID: HRGMv2_4519_48_2
Type: TC
Location: 855 - 2552 (-)
Type: TC
Location: 855 - 2552 (-)
Gene ID: HRGMv2_4519_48_3
Type: CAZyme
Location: 2795 - 4363 (+)
Type: CAZyme
Location: 2795 - 4363 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.