Cluster: HRGMv2_4519_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4519
- CGC Family ID: CGCFAM_02254
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4519_20 | HRGMv2_4519_20_14 | 11342 | 12172 | - | CBM13 |
| TC | HRGMv2_4519_20 | HRGMv2_4519_20_15 | 12445 | 16863 | - | 3.A.1.137.2 |
| TC | HRGMv2_4519_20 | HRGMv2_4519_20_16 | 16864 | 17589 | - | 3.A.1.125.2 |
Gene ID: HRGMv2_4519_20_14
Type: CAZyme
Location: 11342 - 12172 (-)
Type: CAZyme
Location: 11342 - 12172 (-)
Gene ID: HRGMv2_4519_20_15
Type: TC
Location: 12445 - 16863 (-)
Type: TC
Location: 12445 - 16863 (-)
Gene ID: HRGMv2_4519_20_16
Type: TC
Location: 16864 - 17589 (-)
Type: TC
Location: 16864 - 17589 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.