Cluster: HRGMv2_4519_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4519
- CGC Family ID: CGCFAM_01366
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4519_5 | HRGMv2_4519_5_14 | 14285 | 15439 | - | CE9 |
| pfam | HRGMv2_4519_5 | HRGMv2_4519_5_15 | 15631 | 16557 | - | FtsX |
| pfam | HRGMv2_4519_5 | HRGMv2_4519_5_16 | 16560 | 18341 | - | FtsX |
| TC | HRGMv2_4519_5 | HRGMv2_4519_5_17 | 18356 | 19024 | - | 3.A.1.125.3 |
Gene ID: HRGMv2_4519_5_14
Type: CAZyme
Location: 14285 - 15439 (-)
Type: CAZyme
Location: 14285 - 15439 (-)
Gene ID: HRGMv2_4519_5_15
Type: pfam
Location: 15631 - 16557 (-)
Type: pfam
Location: 15631 - 16557 (-)
Gene ID: HRGMv2_4519_5_16
Type: pfam
Location: 16560 - 18341 (-)
Type: pfam
Location: 16560 - 18341 (-)
Gene ID: HRGMv2_4519_5_17
Type: TC
Location: 18356 - 19024 (-)
Type: TC
Location: 18356 - 19024 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.