Cluster: HRGMv2_4519_CGC23
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4519
- CGC Family ID: CGCFAM_10628
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4519_35 | HRGMv2_4519_35_4 | 1737 | 2627 | - | 3.A.1.147.2 |
| TF | HRGMv2_4519_35 | HRGMv2_4519_35_5 | 2631 | 3005 | - | GntR |
| CAZyme | HRGMv2_4519_35 | HRGMv2_4519_35_6 | 3168 | 5096 | + | CBM48 | GH13_14 |
Gene ID: HRGMv2_4519_35_4
Type: TC
Location: 1737 - 2627 (-)
Type: TC
Location: 1737 - 2627 (-)
Gene ID: HRGMv2_4519_35_5
Type: TF
Location: 2631 - 3005 (-)
Type: TF
Location: 2631 - 3005 (-)
Gene ID: HRGMv2_4519_35_6
Type: CAZyme
Location: 3168 - 5096 (+)
Type: CAZyme
Location: 3168 - 5096 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.