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Cluster: HRGMv2_4519_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4519_28 HRGMv2_4519_28_19 13645 15036 + 3.A.1.1.27
TC HRGMv2_4519_28 HRGMv2_4519_28_20 15039 15902 + 3.A.1.1.27
CAZyme HRGMv2_4519_28 HRGMv2_4519_28_21 16059 18062 + GH13_14
CAZyme HRGMv2_4519_28 HRGMv2_4519_28_22 18075 20051 + GH133
CAZyme HRGMv2_4519_28 HRGMv2_4519_28_23 20089 21804 + CBM34 | GH13_20
CAZyme HRGMv2_4519_28 HRGMv2_4519_28_24 21844 23466 + GH13_31
CAZyme HRGMv2_4519_28 HRGMv2_4519_28_25 23471 24994 + GH77
CAZyme HRGMv2_4519_28 HRGMv2_4519_28_26 25040 27304 + GT35
Gene ID: HRGMv2_4519_28_19
Type: TC
Location: 13645 - 15036 (+)
Gene ID: HRGMv2_4519_28_20
Type: TC
Location: 15039 - 15902 (+)
Gene ID: HRGMv2_4519_28_21
Type: CAZyme
Location: 16059 - 18062 (+)
Gene ID: HRGMv2_4519_28_22
Type: CAZyme
Location: 18075 - 20051 (+)
Gene ID: HRGMv2_4519_28_23
Type: CAZyme
Location: 20089 - 21804 (+)
Gene ID: HRGMv2_4519_28_24
Type: CAZyme
Location: 21844 - 23466 (+)
Gene ID: HRGMv2_4519_28_25
Type: CAZyme
Location: 23471 - 24994 (+)
Gene ID: HRGMv2_4519_28_26
Type: CAZyme
Location: 25040 - 27304 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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