Genome Details
Selected Rep_genome_ID: HRGMv2_2671
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| GH142_maxbin.011 | 2,797,445 | 98.32% | 0% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_2671 | 2,815,942 | 98.99% | 0% | Cameroon | Africa | HRGM |
| Rep_3458 | 2,341,197 | 90.8627% | 1.34228% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2671_CGC32 | CGCFAM_00011 | Yes | 5 | 2 | |
| HRGMv2_2671_CGC34 | CGCFAM_00104 | Yes | 4 | 1 | |
| HRGMv2_2671_CGC14 | CGCFAM_00127 | Yes | 4 | 1 | |
| HRGMv2_2671_CGC12 | CGCFAM_00185 | Yes | 4 | 1 | |
| HRGMv2_2671_CGC3 | CGCFAM_02041 | Yes | 4 | 1 | |
| HRGMv2_2671_CGC2 | CGCFAM_03225 | Yes | 4 | 2 | |
| HRGMv2_2671_CGC30 | CGCFAM_03348 | Yes | 4 | 1 | |
| HRGMv2_2671_CGC26 | CGCFAM_04064 | Yes | 8 | 1 | |
| HRGMv2_2671_CGC33 | CGCFAM_04065 | Yes | 7 | 1 | |
| HRGMv2_2671_CGC31 | CGCFAM_04791 | Yes | 7 | 2 | |
| HRGMv2_2671_CGC10 | CGCFAM_05928 | Yes | 4 | 1 | |
| HRGMv2_2671_CGC28 | CGCFAM_07280 | Yes | 5 | 2 | |
| HRGMv2_2671_CGC11 | CGCFAM_07281 | Yes | 5 | 1 | |
| HRGMv2_2671_CGC6 | CGCFAM_07282 | Yes | 7 | 1 | |
| HRGMv2_2671_CGC13 | CGCFAM_10142 | Yes | 4 | 1 | |
| HRGMv2_2671_CGC19 | CGCFAM_10143 | Yes | 4 | 1 | |
| HRGMv2_2671_CGC4 | CGCFAM_10144 | Yes | 3 | 1 |
Top CAZyme Families