Cluster: HRGMv2_2671_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2671
- CGC Family ID: CGCFAM_07281
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2671_6 | HRGMv2_2671_6_4 | 2423 | 4201 | - | 2.A.36.6.4 |
| TC | HRGMv2_2671_6 | HRGMv2_2671_6_5 | 4340 | 4921 | - | 2.A.115.2.14 |
| TC | HRGMv2_2671_6 | HRGMv2_2671_6_6 | 4950 | 6350 | - | 2.A.66.1.32 |
| pfam | HRGMv2_2671_6 | HRGMv2_2671_6_7 | 6523 | 7173 | + | Hydrolase | HAD | HAD_2 |
| CAZyme | HRGMv2_2671_6 | HRGMv2_2671_6_8 | 7184 | 8395 | + | GH5_10 |
Gene ID: HRGMv2_2671_6_4
Type: TC
Location: 2423 - 4201 (-)
Type: TC
Location: 2423 - 4201 (-)
Gene ID: HRGMv2_2671_6_5
Type: TC
Location: 4340 - 4921 (-)
Type: TC
Location: 4340 - 4921 (-)
Gene ID: HRGMv2_2671_6_6
Type: TC
Location: 4950 - 6350 (-)
Type: TC
Location: 4950 - 6350 (-)
Gene ID: HRGMv2_2671_6_7
Type: pfam
Location: 6523 - 7173 (+)
Type: pfam
Location: 6523 - 7173 (+)
Gene ID: HRGMv2_2671_6_8
Type: CAZyme
Location: 7184 - 8395 (+)
Type: CAZyme
Location: 7184 - 8395 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.