Cluster: HRGMv2_2671_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2671
- CGC Family ID: CGCFAM_10142
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2671_6 | HRGMv2_2671_6_87 | 92249 | 92818 | + | 2.A.107.1.2 |
| STP | HRGMv2_2671_6 | HRGMv2_2671_6_88 | 92891 | 93511 | - | HD |
| pfam | HRGMv2_2671_6 | HRGMv2_2671_6_89 | 93580 | 94515 | - | Bactofilin | Bactofilin |
| CAZyme | HRGMv2_2671_6 | HRGMv2_2671_6_90 | 94542 | 95582 | - | CE4 |
Gene ID: HRGMv2_2671_6_87
Type: TC
Location: 92249 - 92818 (+)
Type: TC
Location: 92249 - 92818 (+)
Gene ID: HRGMv2_2671_6_88
Type: STP
Location: 92891 - 93511 (-)
Type: STP
Location: 92891 - 93511 (-)
Gene ID: HRGMv2_2671_6_89
Type: pfam
Location: 93580 - 94515 (-)
Type: pfam
Location: 93580 - 94515 (-)
Gene ID: HRGMv2_2671_6_90
Type: CAZyme
Location: 94542 - 95582 (-)
Type: CAZyme
Location: 94542 - 95582 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.