Cluster: HRGMv2_2671_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2671
- CGC Family ID: CGCFAM_10144
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2671_2 | HRGMv2_2671_2_10 | 7822 | 8907 | - | GH5_8 |
| STP | HRGMv2_2671_2 | HRGMv2_2671_2_11 | 9043 | 10356 | - | SBP_bac_1 |
| TC | HRGMv2_2671_2 | HRGMv2_2671_2_12 | 10353 | 12590 | - | 2.A.21.9.2 |
Gene ID: HRGMv2_2671_2_10
Type: CAZyme
Location: 7822 - 8907 (-)
Type: CAZyme
Location: 7822 - 8907 (-)
Gene ID: HRGMv2_2671_2_11
Type: STP
Location: 9043 - 10356 (-)
Type: STP
Location: 9043 - 10356 (-)
Gene ID: HRGMv2_2671_2_12
Type: TC
Location: 10353 - 12590 (-)
Type: TC
Location: 10353 - 12590 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.