Cluster: HRGMv2_2671_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2671
- CGC Family ID: CGCFAM_03348
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2671_22 | HRGMv2_2671_22_21 | 22321 | 24132 | - | CBM2 | GH5_2 |
| NULL(UNKNOWN) | HRGMv2_2671_22 | HRGMv2_2671_22_22 | 24152 | 24985 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2671_22 | HRGMv2_2671_22_23 | 25177 | 25836 | + | 3.A.1.25.2 |
| TC | HRGMv2_2671_22 | HRGMv2_2671_22_24 | 26688 | 28046 | + | 2.A.66.1.32 |
Gene ID: HRGMv2_2671_22_21
Type: CAZyme
Location: 22321 - 24132 (-)
Type: CAZyme
Location: 22321 - 24132 (-)
Gene ID: HRGMv2_2671_22_22
Type:
Location: 24152 - 24985 (-)
Type:
Location: 24152 - 24985 (-)
Gene ID: HRGMv2_2671_22_23
Type: TC
Location: 25177 - 25836 (+)
Type: TC
Location: 25177 - 25836 (+)
Gene ID: HRGMv2_2671_22_24
Type: TC
Location: 26688 - 28046 (+)
Type: TC
Location: 26688 - 28046 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.