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Cluster: HRGMv2_2671_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2671_18 HRGMv2_2671_18_10 8066 8452 - 9.B.70.1.1
TC HRGMv2_2671_18 HRGMv2_2671_18_11 8474 8668 - 9.B.70.1.1
pfam HRGMv2_2671_18 HRGMv2_2671_18_12 8685 9179 - Spore_III_AB
pfam HRGMv2_2671_18 HRGMv2_2671_18_13 9173 10081 - Spore_III_AA
TC HRGMv2_2671_18 HRGMv2_2671_18_14 10189 12189 - 1.B.52.2.1
pfam HRGMv2_2671_18 HRGMv2_2671_18_15 12243 14024 - tRNA-synt_2 | tRNA_anti-codon | GAD
pfam HRGMv2_2671_18 HRGMv2_2671_18_16 14333 14911 - DUF4358
CAZyme HRGMv2_2671_18 HRGMv2_2671_18_17 14908 16032 - GH26
Gene ID: HRGMv2_2671_18_10
Type: TC
Location: 8066 - 8452 (-)
Gene ID: HRGMv2_2671_18_11
Type: TC
Location: 8474 - 8668 (-)
Gene ID: HRGMv2_2671_18_12
Type: pfam
Location: 8685 - 9179 (-)
Gene ID: HRGMv2_2671_18_13
Type: pfam
Location: 9173 - 10081 (-)
Gene ID: HRGMv2_2671_18_14
Type: TC
Location: 10189 - 12189 (-)
Gene ID: HRGMv2_2671_18_15
Type: pfam
Location: 12243 - 14024 (-)
Gene ID: HRGMv2_2671_18_16
Type: pfam
Location: 14333 - 14911 (-)
Gene ID: HRGMv2_2671_18_17
Type: CAZyme
Location: 14908 - 16032 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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