Cluster: HRGMv2_2671_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2671
- CGC Family ID: CGCFAM_02041
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2671_1 | HRGMv2_2671_1_166 | 176132 | 177670 | + | GH13_44 |
| TC | HRGMv2_2671_1 | HRGMv2_2671_1_167 | 177731 | 178384 | - | 3.A.2.2.1 |
| TC | HRGMv2_2671_1 | HRGMv2_2671_1_168 | 178414 | 179805 | - | 3.A.2.3.3 |
| TC | HRGMv2_2671_1 | HRGMv2_2671_1_169 | 179826 | 181568 | - | 3.A.2.3.2 |
Gene ID: HRGMv2_2671_1_166
Type: CAZyme
Location: 176132 - 177670 (+)
Type: CAZyme
Location: 176132 - 177670 (+)
Gene ID: HRGMv2_2671_1_167
Type: TC
Location: 177731 - 178384 (-)
Type: TC
Location: 177731 - 178384 (-)
Gene ID: HRGMv2_2671_1_168
Type: TC
Location: 178414 - 179805 (-)
Type: TC
Location: 178414 - 179805 (-)
Gene ID: HRGMv2_2671_1_169
Type: TC
Location: 179826 - 181568 (-)
Type: TC
Location: 179826 - 181568 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.