Cluster: HRGMv2_2671_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2671
- CGC Family ID: CGCFAM_03225
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2671_1 | HRGMv2_2671_1_85 | 88925 | 92311 | - | GH2 |
| CAZyme | HRGMv2_2671_1 | HRGMv2_2671_1_86 | 92325 | 93293 | - | GH26 |
| TC | HRGMv2_2671_1 | HRGMv2_2671_1_87 | 93689 | 95596 | - | 3.A.1.135.5 |
| TC | HRGMv2_2671_1 | HRGMv2_2671_1_88 | 95615 | 97360 | - | 3.A.1.135.5 |
Gene ID: HRGMv2_2671_1_85
Type: CAZyme
Location: 88925 - 92311 (-)
Type: CAZyme
Location: 88925 - 92311 (-)
Gene ID: HRGMv2_2671_1_86
Type: CAZyme
Location: 92325 - 93293 (-)
Type: CAZyme
Location: 92325 - 93293 (-)
Gene ID: HRGMv2_2671_1_87
Type: TC
Location: 93689 - 95596 (-)
Type: TC
Location: 93689 - 95596 (-)
Gene ID: HRGMv2_2671_1_88
Type: TC
Location: 95615 - 97360 (-)
Type: TC
Location: 95615 - 97360 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.