Cluster: HRGMv2_2671_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2671
- CGC Family ID: CGCFAM_00127
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2671_8 | HRGMv2_2671_8_14 | 14385 | 15392 | - | GH130_2 |
| STP | HRGMv2_2671_8 | HRGMv2_2671_8_15 | 15920 | 16132 | + | FeoA |
| STP | HRGMv2_2671_8 | HRGMv2_2671_8_16 | 16157 | 16378 | + | FeoA |
| TC | HRGMv2_2671_8 | HRGMv2_2671_8_17 | 16473 | 19049 | + | 9.A.8.1.6 |
Gene ID: HRGMv2_2671_8_14
Type: CAZyme
Location: 14385 - 15392 (-)
Type: CAZyme
Location: 14385 - 15392 (-)
Gene ID: HRGMv2_2671_8_15
Type: STP
Location: 15920 - 16132 (+)
Type: STP
Location: 15920 - 16132 (+)
Gene ID: HRGMv2_2671_8_16
Type: STP
Location: 16157 - 16378 (+)
Type: STP
Location: 16157 - 16378 (+)
Gene ID: HRGMv2_2671_8_17
Type: TC
Location: 16473 - 19049 (+)
Type: TC
Location: 16473 - 19049 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2671_8_16 | vegetarian > omnivore | 1.16923 | 0.01054 |