Cluster: HRGMv2_2671_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2671
- CGC Family ID: CGCFAM_00185
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2671_6 | HRGMv2_2671_6_62 | 63436 | 64395 | + | GT2 |
| TC | HRGMv2_2671_6 | HRGMv2_2671_6_63 | 64432 | 65328 | - | 3.A.1.121.4 |
| pfam | HRGMv2_2671_6 | HRGMv2_2671_6_64 | 65466 | 66563 | - | VCA0040-like | VCA0040-like |
| TC | HRGMv2_2671_6 | HRGMv2_2671_6_65 | 66580 | 69048 | - | 3.A.3.30.3 |
Gene ID: HRGMv2_2671_6_62
Type: CAZyme
Location: 63436 - 64395 (+)
Type: CAZyme
Location: 63436 - 64395 (+)
Gene ID: HRGMv2_2671_6_63
Type: TC
Location: 64432 - 65328 (-)
Type: TC
Location: 64432 - 65328 (-)
Gene ID: HRGMv2_2671_6_64
Type: pfam
Location: 65466 - 66563 (-)
Type: pfam
Location: 65466 - 66563 (-)
Gene ID: HRGMv2_2671_6_65
Type: TC
Location: 66580 - 69048 (-)
Type: TC
Location: 66580 - 69048 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.