Cluster: HRGMv2_2671_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2671
- CGC Family ID: CGCFAM_10143
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2671_11 | HRGMv2_2671_11_11 | 7524 | 8597 | - | CE2 |
| pfam | HRGMv2_2671_11 | HRGMv2_2671_11_12 | 8772 | 9464 | - | DUF4367 |
| STP | HRGMv2_2671_11 | HRGMv2_2671_11_13 | 9451 | 9990 | - | Sigma70_r2 | Sigma70_r4_2 |
| TC | HRGMv2_2671_11 | HRGMv2_2671_11_14 | 10152 | 12128 | - | 1.B.52.2.1 |
Gene ID: HRGMv2_2671_11_11
Type: CAZyme
Location: 7524 - 8597 (-)
Type: CAZyme
Location: 7524 - 8597 (-)
Gene ID: HRGMv2_2671_11_12
Type: pfam
Location: 8772 - 9464 (-)
Type: pfam
Location: 8772 - 9464 (-)
Gene ID: HRGMv2_2671_11_13
Type: STP
Location: 9451 - 9990 (-)
Type: STP
Location: 9451 - 9990 (-)
Gene ID: HRGMv2_2671_11_14
Type: TC
Location: 10152 - 12128 (-)
Type: TC
Location: 10152 - 12128 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.