Cluster: HRGMv2_2671_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2671
- CGC Family ID: CGCFAM_05928
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2671_5 | HRGMv2_2671_5_50 | 47835 | 50150 | + | GH31_3 |
| pfam | HRGMv2_2671_5 | HRGMv2_2671_5_51 | 50443 | 51024 | + | Thia_YuaJ |
| pfam | HRGMv2_2671_5 | HRGMv2_2671_5_52 | 51077 | 52024 | - | SUFBD_core |
| TC | HRGMv2_2671_5 | HRGMv2_2671_5_53 | 52021 | 52746 | - | 3.A.1.6.7 |
Gene ID: HRGMv2_2671_5_50
Type: CAZyme
Location: 47835 - 50150 (+)
Type: CAZyme
Location: 47835 - 50150 (+)
Gene ID: HRGMv2_2671_5_51
Type: pfam
Location: 50443 - 51024 (+)
Type: pfam
Location: 50443 - 51024 (+)
Gene ID: HRGMv2_2671_5_52
Type: pfam
Location: 51077 - 52024 (-)
Type: pfam
Location: 51077 - 52024 (-)
Gene ID: HRGMv2_2671_5_53
Type: TC
Location: 52021 - 52746 (-)
Type: TC
Location: 52021 - 52746 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.