Cluster: HRGMv2_2671_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2671
- CGC Family ID: CGCFAM_00011
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2671_29 | HRGMv2_2671_29_4 | 3931 | 5892 | + | 9.B.34.1.2 |
| CAZyme | HRGMv2_2671_29 | HRGMv2_2671_29_5 | 6088 | 6888 | + | GT2 |
| CAZyme | HRGMv2_2671_29 | HRGMv2_2671_29_6 | 6888 | 7910 | + | GT2 |
| TC | HRGMv2_2671_29 | HRGMv2_2671_29_7 | 7928 | 8728 | + | 3.A.1.103.4 |
| TC | HRGMv2_2671_29 | HRGMv2_2671_29_8 | 8742 | 9482 | + | 3.A.1.103.1 |
Gene ID: HRGMv2_2671_29_4
Type: TC
Location: 3931 - 5892 (+)
Type: TC
Location: 3931 - 5892 (+)
Gene ID: HRGMv2_2671_29_5
Type: CAZyme
Location: 6088 - 6888 (+)
Type: CAZyme
Location: 6088 - 6888 (+)
Gene ID: HRGMv2_2671_29_6
Type: CAZyme
Location: 6888 - 7910 (+)
Type: CAZyme
Location: 6888 - 7910 (+)
Gene ID: HRGMv2_2671_29_7
Type: TC
Location: 7928 - 8728 (+)
Type: TC
Location: 7928 - 8728 (+)
Gene ID: HRGMv2_2671_29_8
Type: TC
Location: 8742 - 9482 (+)
Type: TC
Location: 8742 - 9482 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.