Genome Details
Selected Rep_genome_ID: HRGMv2_2325
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus sp900753685
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG136_19_sub | 2,471,255 | 95.3% | 0% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_2325 | 2,808,426 | 99.14% | 0% | UK | Europe | HRGM |
| MGYG000001961 | 2,208,468 | 92.62% | 0.69% | Denmark | Europe | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2325_CGC16 | CGCFAM_00007 | Yes | 3 | 1 | |
| HRGMv2_2325_CGC18 | CGCFAM_00008 | Yes | 5 | 2 | |
| HRGMv2_2325_CGC5 | CGCFAM_00008 | Yes | 6 | 4 | |
| HRGMv2_2325_CGC11 | CGCFAM_00010 | Yes | 6 | 1 | alpha-glucan |
| HRGMv2_2325_CGC17 | CGCFAM_00011 | Yes | 6 | 3 | |
| HRGMv2_2325_CGC4 | CGCFAM_00086 | Yes | 4 | 1 | |
| HRGMv2_2325_CGC22 | CGCFAM_00281 | Yes | 7 | 3 | |
| HRGMv2_2325_CGC21 | CGCFAM_00383 | Yes | 3 | 1 | |
| HRGMv2_2325_CGC14 | CGCFAM_00642 | Yes | 8 | 2 | |
| HRGMv2_2325_CGC15 | CGCFAM_02430 | Yes | 15 | 2 | |
| HRGMv2_2325_CGC6 | CGCFAM_02895 | Yes | 12 | 3 | |
| HRGMv2_2325_CGC19 | CGCFAM_03448 | Yes | 6 | 1 | |
| HRGMv2_2325_CGC10 | CGCFAM_04044 | Yes | 7 | 1 | |
| HRGMv2_2325_CGC12 | CGCFAM_04046 | Yes | 8 | 3 | |
| HRGMv2_2325_CGC8 | CGCFAM_05068 | Yes | 22 | 10 | |
| HRGMv2_2325_CGC1 | CGCFAM_10004 | Yes | 15 | 3 | |
| HRGMv2_2325_CGC7 | CGCFAM_10005 | Yes | 9 | 1 |
Top CAZyme Families