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Cluster: HRGMv2_2325_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2325_9 HRGMv2_2325_9_35 42763 43527 - 3.A.1.5.32
TC HRGMv2_2325_9 HRGMv2_2325_9_36 43520 44527 - 3.A.1.5.35
TC HRGMv2_2325_9 HRGMv2_2325_9_37 44529 45359 - 3.A.1.5.11
TC HRGMv2_2325_9 HRGMv2_2325_9_38 45362 46309 - 3.A.1.5.11
TC HRGMv2_2325_9 HRGMv2_2325_9_39 46331 47923 - 3.A.1.5.17
pfam HRGMv2_2325_9 HRGMv2_2325_9_40 48095 49024 - EamA | EamA
CAZyme HRGMv2_2325_9 HRGMv2_2325_9_41 49021 50457 - GT5
Gene ID: HRGMv2_2325_9_35
Type: TC
Location: 42763 - 43527 (-)
Gene ID: HRGMv2_2325_9_36
Type: TC
Location: 43520 - 44527 (-)
Gene ID: HRGMv2_2325_9_37
Type: TC
Location: 44529 - 45359 (-)
Gene ID: HRGMv2_2325_9_38
Type: TC
Location: 45362 - 46309 (-)
Gene ID: HRGMv2_2325_9_39
Type: TC
Location: 46331 - 47923 (-)
Gene ID: HRGMv2_2325_9_40
Type: pfam
Location: 48095 - 49024 (-)
Gene ID: HRGMv2_2325_9_41
Type: CAZyme
Location: 49021 - 50457 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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