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Cluster: HRGMv2_2325_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2325_24 HRGMv2_2325_24_14 12541 13875 + 1.A.26.1.2
TF HRGMv2_2325_24 HRGMv2_2325_24_15 14052 14774 + Trans_reg_C
TC HRGMv2_2325_24 HRGMv2_2325_24_16 14856 15770 + 3.A.1.131.1
pfam HRGMv2_2325_24 HRGMv2_2325_24_17 15763 16587 + ABC2_membrane_2 | ABC2_membrane_3 | ABC2_membrane_4
STP HRGMv2_2325_24 HRGMv2_2325_24_18 16603 17493 + HATPase_c | HisKA
CAZyme HRGMv2_2325_24 HRGMv2_2325_24_19 17576 20071 - GT35
pfam HRGMv2_2325_24 HRGMv2_2325_24_20 20098 23250 - tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915
pfam HRGMv2_2325_24 HRGMv2_2325_24_21 23707 25011 + Biotin_lipoyl_2
TC HRGMv2_2325_24 HRGMv2_2325_24_22 25008 25715 + 3.A.1.122.2
NULL(UNKNOWN) HRGMv2_2325_24 HRGMv2_2325_24_23 25687 27288 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2325_24 HRGMv2_2325_24_24 27303 28556 + 3.A.1.122.2
CAZyme HRGMv2_2325_24 HRGMv2_2325_24_25 28990 30699 - GH18
NULL(UNKNOWN) HRGMv2_2325_24 HRGMv2_2325_24_26 30730 31320 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2325_24 HRGMv2_2325_24_27 31729 32514 + MecA
TC HRGMv2_2325_24 HRGMv2_2325_24_28 32617 34815 - 8.A.43.1.1
Gene ID: HRGMv2_2325_24_14
Type: TC
Location: 12541 - 13875 (+)
Gene ID: HRGMv2_2325_24_15
Type: TF
Location: 14052 - 14774 (+)
Gene ID: HRGMv2_2325_24_16
Type: TC
Location: 14856 - 15770 (+)
Gene ID: HRGMv2_2325_24_17
Type: pfam
Location: 15763 - 16587 (+)
Gene ID: HRGMv2_2325_24_18
Type: STP
Location: 16603 - 17493 (+)
Gene ID: HRGMv2_2325_24_19
Type: CAZyme
Location: 17576 - 20071 (-)
Gene ID: HRGMv2_2325_24_20
Type: pfam
Location: 20098 - 23250 (-)
Gene ID: HRGMv2_2325_24_21
Type: pfam
Location: 23707 - 25011 (+)
Gene ID: HRGMv2_2325_24_22
Type: TC
Location: 25008 - 25715 (+)
Gene ID: HRGMv2_2325_24_23
Type:
Location: 25687 - 27288 (+)
Gene ID: HRGMv2_2325_24_24
Type: TC
Location: 27303 - 28556 (+)
Gene ID: HRGMv2_2325_24_25
Type: CAZyme
Location: 28990 - 30699 (-)
Gene ID: HRGMv2_2325_24_26
Type:
Location: 30730 - 31320 (-)
Gene ID: HRGMv2_2325_24_27
Type: pfam
Location: 31729 - 32514 (+)
Gene ID: HRGMv2_2325_24_28
Type: TC
Location: 32617 - 34815 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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