Cluster: HRGMv2_2325_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2325
- CGC Family ID: CGCFAM_00086
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2325_3 | HRGMv2_2325_3_76 | 75157 | 76995 | + | 3.A.16.1.1 |
| CAZyme | HRGMv2_2325_3 | HRGMv2_2325_3_77 | 77355 | 79466 | + | GH13_39 |
| TC | HRGMv2_2325_3 | HRGMv2_2325_3_78 | 79820 | 81946 | + | 4.A.1.1.14 |
| TC | HRGMv2_2325_3 | HRGMv2_2325_3_79 | 82469 | 86914 | + | 3.A.7.17.1 |
Gene ID: HRGMv2_2325_3_76
Type: TC
Location: 75157 - 76995 (+)
Type: TC
Location: 75157 - 76995 (+)
Gene ID: HRGMv2_2325_3_77
Type: CAZyme
Location: 77355 - 79466 (+)
Type: CAZyme
Location: 77355 - 79466 (+)
Gene ID: HRGMv2_2325_3_78
Type: TC
Location: 79820 - 81946 (+)
Type: TC
Location: 79820 - 81946 (+)
Gene ID: HRGMv2_2325_3_79
Type: TC
Location: 82469 - 86914 (+)
Type: TC
Location: 82469 - 86914 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus sp900753685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.