Cluster: HRGMv2_2325_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2325
- CGC Family ID: CGCFAM_00008
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2325_4 | HRGMv2_2325_4_21 | 18351 | 19295 | - | GT2 |
| CAZyme | HRGMv2_2325_4 | HRGMv2_2325_4_22 | 19268 | 20467 | - | GT2 |
| TC | HRGMv2_2325_4 | HRGMv2_2325_4_23 | 20479 | 21219 | - | 3.A.1.103.1 |
| TC | HRGMv2_2325_4 | HRGMv2_2325_4_24 | 21231 | 22019 | - | 3.A.1.103.6 |
| CAZyme | HRGMv2_2325_4 | HRGMv2_2325_4_25 | 22044 | 23048 | - | GT2 |
| CAZyme | HRGMv2_2325_4 | HRGMv2_2325_4_26 | 23114 | 24142 | - | GT2 |
Gene ID: HRGMv2_2325_4_21
Type: CAZyme
Location: 18351 - 19295 (-)
Type: CAZyme
Location: 18351 - 19295 (-)
Gene ID: HRGMv2_2325_4_22
Type: CAZyme
Location: 19268 - 20467 (-)
Type: CAZyme
Location: 19268 - 20467 (-)
Gene ID: HRGMv2_2325_4_23
Type: TC
Location: 20479 - 21219 (-)
Type: TC
Location: 20479 - 21219 (-)
Gene ID: HRGMv2_2325_4_24
Type: TC
Location: 21231 - 22019 (-)
Type: TC
Location: 21231 - 22019 (-)
Gene ID: HRGMv2_2325_4_25
Type: CAZyme
Location: 22044 - 23048 (-)
Type: CAZyme
Location: 22044 - 23048 (-)
Gene ID: HRGMv2_2325_4_26
Type: CAZyme
Location: 23114 - 24142 (-)
Type: CAZyme
Location: 23114 - 24142 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus sp900753685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.