Cluster: HRGMv2_2325_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2325
- CGC Family ID: CGCFAM_00010
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2325_11 | HRGMv2_2325_11_15 | 12750 | 14234 | - | GH77 |
| TC | HRGMv2_2325_11 | HRGMv2_2325_11_16 | 14259 | 15356 | - | 3.A.1.1.22 |
| TF | HRGMv2_2325_11 | HRGMv2_2325_11_17 | 15377 | 16381 | - | LacI |
| TC | HRGMv2_2325_11 | HRGMv2_2325_11_18 | 16396 | 17241 | - | 3.A.1.1.45 |
| TC | HRGMv2_2325_11 | HRGMv2_2325_11_19 | 17241 | 18161 | - | 3.A.1.1.45 |
| TC | HRGMv2_2325_11 | HRGMv2_2325_11_20 | 18238 | 19572 | - | 3.A.1.1.45 |
Gene ID: HRGMv2_2325_11_15
Type: CAZyme
Location: 12750 - 14234 (-)
Type: CAZyme
Location: 12750 - 14234 (-)
Gene ID: HRGMv2_2325_11_16
Type: TC
Location: 14259 - 15356 (-)
Type: TC
Location: 14259 - 15356 (-)
Gene ID: HRGMv2_2325_11_17
Type: TF
Location: 15377 - 16381 (-)
Type: TF
Location: 15377 - 16381 (-)
Gene ID: HRGMv2_2325_11_18
Type: TC
Location: 16396 - 17241 (-)
Type: TC
Location: 16396 - 17241 (-)
Gene ID: HRGMv2_2325_11_19
Type: TC
Location: 17241 - 18161 (-)
Type: TC
Location: 17241 - 18161 (-)
Gene ID: HRGMv2_2325_11_20
Type: TC
Location: 18238 - 19572 (-)
Type: TC
Location: 18238 - 19572 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus sp900753685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.