Cluster: HRGMv2_2325_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2325
- CGC Family ID: CGCFAM_03448
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2325_32 | HRGMv2_2325_32_17 | 18749 | 21373 | + | 4.A.2.1.17 |
| STP | HRGMv2_2325_32 | HRGMv2_2325_32_18 | 21672 | 21968 | + | Nitroreductase |
| CAZyme | HRGMv2_2325_32 | HRGMv2_2325_32_19 | 22081 | 23811 | + | GH73 |
| TC | HRGMv2_2325_32 | HRGMv2_2325_32_20 | 24048 | 24896 | + | 3.A.1.3.25 |
| TC | HRGMv2_2325_32 | HRGMv2_2325_32_21 | 25034 | 25711 | + | 3.A.1.3.25 |
| TC | HRGMv2_2325_32 | HRGMv2_2325_32_22 | 25692 | 26432 | + | 3.A.1.3.25 |
Gene ID: HRGMv2_2325_32_17
Type: TC
Location: 18749 - 21373 (+)
Type: TC
Location: 18749 - 21373 (+)
Gene ID: HRGMv2_2325_32_18
Type: STP
Location: 21672 - 21968 (+)
Type: STP
Location: 21672 - 21968 (+)
Gene ID: HRGMv2_2325_32_19
Type: CAZyme
Location: 22081 - 23811 (+)
Type: CAZyme
Location: 22081 - 23811 (+)
Gene ID: HRGMv2_2325_32_20
Type: TC
Location: 24048 - 24896 (+)
Type: TC
Location: 24048 - 24896 (+)
Gene ID: HRGMv2_2325_32_21
Type: TC
Location: 25034 - 25711 (+)
Type: TC
Location: 25034 - 25711 (+)
Gene ID: HRGMv2_2325_32_22
Type: TC
Location: 25692 - 26432 (+)
Type: TC
Location: 25692 - 26432 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus sp900753685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.