dbCAN Logo

Cluster: HRGMv2_2325_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2325_17 HRGMv2_2325_17_64 41627 43498 - GH13_4
TC HRGMv2_2325_17 HRGMv2_2325_17_65 43559 44656 - 3.A.1.1.26
pfam HRGMv2_2325_17 HRGMv2_2325_17_66 44688 46178 - GalP_UDP_transf | GalP_UDP_tr_C
pfam HRGMv2_2325_17 HRGMv2_2325_17_67 46172 47341 - GHMP_kinases_N | GHMP_kinases_C | GalKase_gal_bdg
CAZyme HRGMv2_2325_17 HRGMv2_2325_17_68 47375 49009 - GH13_31
CAZyme HRGMv2_2325_17 HRGMv2_2325_17_69 49016 51199 - GH36
TC HRGMv2_2325_17 HRGMv2_2325_17_70 51216 52052 - 3.A.1.1.28
TC HRGMv2_2325_17 HRGMv2_2325_17_71 52052 52927 - 3.A.1.1.28
Gene ID: HRGMv2_2325_17_64
Type: CAZyme
Location: 41627 - 43498 (-)
Gene ID: HRGMv2_2325_17_65
Type: TC
Location: 43559 - 44656 (-)
Gene ID: HRGMv2_2325_17_66
Type: pfam
Location: 44688 - 46178 (-)
Gene ID: HRGMv2_2325_17_67
Type: pfam
Location: 46172 - 47341 (-)
Gene ID: HRGMv2_2325_17_68
Type: CAZyme
Location: 47375 - 49009 (-)
Gene ID: HRGMv2_2325_17_69
Type: CAZyme
Location: 49016 - 51199 (-)
Gene ID: HRGMv2_2325_17_70
Type: TC
Location: 51216 - 52052 (-)
Gene ID: HRGMv2_2325_17_71
Type: TC
Location: 52052 - 52927 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2325_17_70 vegan > omnivore 1.01083 0.03944

🧭 Explore Read Mapping of CGC

← Back to Cluster List