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Cluster: HRGMv2_2325_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2325_22 HRGMv2_2325_22_25 31641 32984 + GH13_20
CAZyme HRGMv2_2325_22 HRGMv2_2325_22_26 32995 34995 + CBM48 | GH13_9
pfam HRGMv2_2325_22 HRGMv2_2325_22_27 35046 35321 + BofA
NULL(UNKNOWN) HRGMv2_2325_22 HRGMv2_2325_22_28 35563 36432 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2325_22 HRGMv2_2325_22_29 36445 37734 + 3.A.7.15.1
NULL(UNKNOWN) HRGMv2_2325_22 HRGMv2_2325_22_30 37731 38480 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2325_22 HRGMv2_2325_22_31 38492 39706 + aBig_2
TC HRGMv2_2325_22 HRGMv2_2325_22_32 39718 39885 + 1.E.52.1.1
Gene ID: HRGMv2_2325_22_25
Type: CAZyme
Location: 31641 - 32984 (+)
Gene ID: HRGMv2_2325_22_26
Type: CAZyme
Location: 32995 - 34995 (+)
Gene ID: HRGMv2_2325_22_27
Type: pfam
Location: 35046 - 35321 (+)
Gene ID: HRGMv2_2325_22_28
Type:
Location: 35563 - 36432 (+)
Gene ID: HRGMv2_2325_22_29
Type: TC
Location: 36445 - 37734 (+)
Gene ID: HRGMv2_2325_22_30
Type:
Location: 37731 - 38480 (+)
Gene ID: HRGMv2_2325_22_31
Type: pfam
Location: 38492 - 39706 (+)
Gene ID: HRGMv2_2325_22_32
Type: TC
Location: 39718 - 39885 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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