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Cluster: HRGMv2_2325_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2325_6 HRGMv2_2325_6_3 2470 3195 - 3.A.1.3.25
TC HRGMv2_2325_6 HRGMv2_2325_6_4 3182 3895 - 3.A.1.3.15
TC HRGMv2_2325_6 HRGMv2_2325_6_5 3931 4767 - 3.A.1.3.15
pfam HRGMv2_2325_6 HRGMv2_2325_6_6 4864 5511 - UPF0029 | DUF1949
CAZyme HRGMv2_2325_6 HRGMv2_2325_6_7 5655 8234 + GT51
pfam HRGMv2_2325_6 HRGMv2_2325_6_8 8307 8663 - SpoVAC_SpoVAEB
STP HRGMv2_2325_6 HRGMv2_2325_6_9 8703 9875 - Aminotran_1_2
TC HRGMv2_2325_6 HRGMv2_2325_6_10 9928 10965 - 9.A.11.1.1
TC HRGMv2_2325_6 HRGMv2_2325_6_11 10990 11436 - 9.A.11.1.1
Gene ID: HRGMv2_2325_6_3
Type: TC
Location: 2470 - 3195 (-)
Gene ID: HRGMv2_2325_6_4
Type: TC
Location: 3182 - 3895 (-)
Gene ID: HRGMv2_2325_6_5
Type: TC
Location: 3931 - 4767 (-)
Gene ID: HRGMv2_2325_6_6
Type: pfam
Location: 4864 - 5511 (-)
Gene ID: HRGMv2_2325_6_7
Type: CAZyme
Location: 5655 - 8234 (+)
Gene ID: HRGMv2_2325_6_8
Type: pfam
Location: 8307 - 8663 (-)
Gene ID: HRGMv2_2325_6_9
Type: STP
Location: 8703 - 9875 (-)
Gene ID: HRGMv2_2325_6_10
Type: TC
Location: 9928 - 10965 (-)
Gene ID: HRGMv2_2325_6_11
Type: TC
Location: 10990 - 11436 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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