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Cluster: HRGMv2_2325_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2325_5 HRGMv2_2325_5_15 15413 18220 + GH73
pfam HRGMv2_2325_5 HRGMv2_2325_5_16 18236 19168 + Cohesin | Cadherin-like
NULL(UNKNOWN) HRGMv2_2325_5 HRGMv2_2325_5_17 19646 20446 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2325_5 HRGMv2_2325_5_18 20543 21265 + CE4
pfam HRGMv2_2325_5 HRGMv2_2325_5_19 21326 22237 + AP_endonuc_2
pfam HRGMv2_2325_5 HRGMv2_2325_5_20 22237 23499 + DegT_DnrJ_EryC1 | Cys_Met_Meta_PP
TC HRGMv2_2325_5 HRGMv2_2325_5_21 23666 25066 + 2.A.25.1.4
TF HRGMv2_2325_5 HRGMv2_2325_5_22 25094 25999 + HTH_1
TC HRGMv2_2325_5 HRGMv2_2325_5_23 26166 27200 + 3.A.1.24.6
TC HRGMv2_2325_5 HRGMv2_2325_5_24 27193 27873 + 3.A.1.24.5
TC HRGMv2_2325_5 HRGMv2_2325_5_25 27870 28631 + 3.A.1.24.1
CAZyme HRGMv2_2325_5 HRGMv2_2325_5_26 28637 29659 + AA4
Gene ID: HRGMv2_2325_5_15
Type: CAZyme
Location: 15413 - 18220 (+)
Gene ID: HRGMv2_2325_5_16
Type: pfam
Location: 18236 - 19168 (+)
Gene ID: HRGMv2_2325_5_17
Type:
Location: 19646 - 20446 (+)
Gene ID: HRGMv2_2325_5_18
Type: CAZyme
Location: 20543 - 21265 (+)
Gene ID: HRGMv2_2325_5_19
Type: pfam
Location: 21326 - 22237 (+)
Gene ID: HRGMv2_2325_5_20
Type: pfam
Location: 22237 - 23499 (+)
Gene ID: HRGMv2_2325_5_21
Type: TC
Location: 23666 - 25066 (+)
Gene ID: HRGMv2_2325_5_22
Type: TF
Location: 25094 - 25999 (+)
Gene ID: HRGMv2_2325_5_23
Type: TC
Location: 26166 - 27200 (+)
Gene ID: HRGMv2_2325_5_24
Type: TC
Location: 27193 - 27873 (+)
Gene ID: HRGMv2_2325_5_25
Type: TC
Location: 27870 - 28631 (+)
Gene ID: HRGMv2_2325_5_26
Type: CAZyme
Location: 28637 - 29659 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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