Cluster: HRGMv2_2325_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2325
- CGC Family ID: CGCFAM_00007
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2325_25 | HRGMv2_2325_25_20 | 19949 | 21400 | + | 9.B.18.1.2 |
| pfam | HRGMv2_2325_25 | HRGMv2_2325_25_21 | 22189 | 22524 | + | NAD_Gly3P_dh_N | Glyco_hydro_4 | UDPG_MGDP_dh_N |
| CAZyme | HRGMv2_2325_25 | HRGMv2_2325_25_22 | 23221 | 24342 | + | GT4 |
Gene ID: HRGMv2_2325_25_20
Type: TC
Location: 19949 - 21400 (+)
Type: TC
Location: 19949 - 21400 (+)
Gene ID: HRGMv2_2325_25_21
Type: pfam
Location: 22189 - 22524 (+)
Type: pfam
Location: 22189 - 22524 (+)
Gene ID: HRGMv2_2325_25_22
Type: CAZyme
Location: 23221 - 24342 (+)
Type: CAZyme
Location: 23221 - 24342 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus sp900753685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.