Cluster: HRGMv2_2325_CGC22
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2325
- CGC Family ID: CGCFAM_00281
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2325_47 | HRGMv2_2325_47_3 | 1459 | 2415 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_2325_47 | HRGMv2_2325_47_4 | 2412 | 4874 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2325_47 | HRGMv2_2325_47_5 | 4919 | 6226 | - | GT4 |
| CAZyme | HRGMv2_2325_47 | HRGMv2_2325_47_6 | 6237 | 7289 | - | GT4 |
| pfam | HRGMv2_2325_47 | HRGMv2_2325_47_7 | 7294 | 8805 | - | MetW | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 |
| TC | HRGMv2_2325_47 | HRGMv2_2325_47_8 | 8815 | 10104 | - | 3.A.1.103.4 |
| TC | HRGMv2_2325_47 | HRGMv2_2325_47_9 | 10104 | 10880 | - | 3.A.1.103.4 |
Gene ID: HRGMv2_2325_47_3
Type: CAZyme
Location: 1459 - 2415 (-)
Type: CAZyme
Location: 1459 - 2415 (-)
Gene ID: HRGMv2_2325_47_4
Type:
Location: 2412 - 4874 (-)
Type:
Location: 2412 - 4874 (-)
Gene ID: HRGMv2_2325_47_5
Type: CAZyme
Location: 4919 - 6226 (-)
Type: CAZyme
Location: 4919 - 6226 (-)
Gene ID: HRGMv2_2325_47_6
Type: CAZyme
Location: 6237 - 7289 (-)
Type: CAZyme
Location: 6237 - 7289 (-)
Gene ID: HRGMv2_2325_47_7
Type: pfam
Location: 7294 - 8805 (-)
Type: pfam
Location: 7294 - 8805 (-)
Gene ID: HRGMv2_2325_47_8
Type: TC
Location: 8815 - 10104 (-)
Type: TC
Location: 8815 - 10104 (-)
Gene ID: HRGMv2_2325_47_9
Type: TC
Location: 10104 - 10880 (-)
Type: TC
Location: 10104 - 10880 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus sp900753685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.