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Cluster: HRGMv2_2325_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2325_8 HRGMv2_2325_8_3 3456 4196 - GT2
pfam HRGMv2_2325_8 HRGMv2_2325_8_4 4213 5862 - DUF6311
CAZyme HRGMv2_2325_8 HRGMv2_2325_8_5 5855 7045 - GT4
CAZyme HRGMv2_2325_8 HRGMv2_2325_8_6 7045 8115 - GT4
CAZyme HRGMv2_2325_8 HRGMv2_2325_8_7 8112 9320 - GT4
NULL(UNKNOWN) HRGMv2_2325_8 HRGMv2_2325_8_8 9317 9838 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2325_8 HRGMv2_2325_8_9 9856 10917 - MetW | Methyltransf_11 | Methyltransf_23 | Methyltransf_25
TC HRGMv2_2325_8 HRGMv2_2325_8_10 10920 12221 - 3.A.1.103.4
TC HRGMv2_2325_8 HRGMv2_2325_8_11 12222 12998 - 3.A.1.103.4
CAZyme HRGMv2_2325_8 HRGMv2_2325_8_12 12973 14250 - GT4
CAZyme HRGMv2_2325_8 HRGMv2_2325_8_13 14256 15194 - GT2
CAZyme HRGMv2_2325_8 HRGMv2_2325_8_14 15199 15957 - GT2
TC HRGMv2_2325_8 HRGMv2_2325_8_15 15961 17379 - 9.B.18.1.3
CAZyme HRGMv2_2325_8 HRGMv2_2325_8_16 17404 19056 - GH25
TC HRGMv2_2325_8 HRGMv2_2325_8_17 19157 21364 - 3.A.7.16.1
TC HRGMv2_2325_8 HRGMv2_2325_8_18 21445 22440 - 9.B.157.1.1
pfam HRGMv2_2325_8 HRGMv2_2325_8_19 22509 25109 - YfhO
CAZyme HRGMv2_2325_8 HRGMv2_2325_8_20 25112 26053 - GT2
STP HRGMv2_2325_8 HRGMv2_2325_8_21 26198 26395 - HMA
TC HRGMv2_2325_8 HRGMv2_2325_8_22 26447 28996 - 3.A.3.5.15
pfam HRGMv2_2325_8 HRGMv2_2325_8_23 29021 29326 - Trns_repr_metal
CAZyme HRGMv2_2325_8 HRGMv2_2325_8_24 29494 30513 - GT2
Gene ID: HRGMv2_2325_8_3
Type: CAZyme
Location: 3456 - 4196 (-)
Gene ID: HRGMv2_2325_8_4
Type: pfam
Location: 4213 - 5862 (-)
Gene ID: HRGMv2_2325_8_5
Type: CAZyme
Location: 5855 - 7045 (-)
Gene ID: HRGMv2_2325_8_6
Type: CAZyme
Location: 7045 - 8115 (-)
Gene ID: HRGMv2_2325_8_7
Type: CAZyme
Location: 8112 - 9320 (-)
Gene ID: HRGMv2_2325_8_8
Type:
Location: 9317 - 9838 (-)
Gene ID: HRGMv2_2325_8_9
Type: pfam
Location: 9856 - 10917 (-)
Gene ID: HRGMv2_2325_8_10
Type: TC
Location: 10920 - 12221 (-)
Gene ID: HRGMv2_2325_8_11
Type: TC
Location: 12222 - 12998 (-)
Gene ID: HRGMv2_2325_8_12
Type: CAZyme
Location: 12973 - 14250 (-)
Gene ID: HRGMv2_2325_8_13
Type: CAZyme
Location: 14256 - 15194 (-)
Gene ID: HRGMv2_2325_8_14
Type: CAZyme
Location: 15199 - 15957 (-)
Gene ID: HRGMv2_2325_8_15
Type: TC
Location: 15961 - 17379 (-)
Gene ID: HRGMv2_2325_8_16
Type: CAZyme
Location: 17404 - 19056 (-)
Gene ID: HRGMv2_2325_8_17
Type: TC
Location: 19157 - 21364 (-)
Gene ID: HRGMv2_2325_8_18
Type: TC
Location: 21445 - 22440 (-)
Gene ID: HRGMv2_2325_8_19
Type: pfam
Location: 22509 - 25109 (-)
Gene ID: HRGMv2_2325_8_20
Type: CAZyme
Location: 25112 - 26053 (-)
Gene ID: HRGMv2_2325_8_21
Type: STP
Location: 26198 - 26395 (-)
Gene ID: HRGMv2_2325_8_22
Type: TC
Location: 26447 - 28996 (-)
Gene ID: HRGMv2_2325_8_23
Type: pfam
Location: 29021 - 29326 (-)
Gene ID: HRGMv2_2325_8_24
Type: CAZyme
Location: 29494 - 30513 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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