Cluster: HRGMv2_2325_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2325
- CGC Family ID: CGCFAM_00008
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2325_27 | HRGMv2_2325_27_15 | 22326 | 25397 | - | GT2 |
| TC | HRGMv2_2325_27 | HRGMv2_2325_27_16 | 25412 | 26965 | - | 3.A.1.103.1 |
| TC | HRGMv2_2325_27 | HRGMv2_2325_27_17 | 26990 | 27775 | - | 3.A.1.103.6 |
| NULL(UNKNOWN) | HRGMv2_2325_27 | HRGMv2_2325_27_18 | 27813 | 29189 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2325_27 | HRGMv2_2325_27_19 | 29189 | 30421 | - | GT2 |
Gene ID: HRGMv2_2325_27_15
Type: CAZyme
Location: 22326 - 25397 (-)
Type: CAZyme
Location: 22326 - 25397 (-)
Gene ID: HRGMv2_2325_27_16
Type: TC
Location: 25412 - 26965 (-)
Type: TC
Location: 25412 - 26965 (-)
Gene ID: HRGMv2_2325_27_17
Type: TC
Location: 26990 - 27775 (-)
Type: TC
Location: 26990 - 27775 (-)
Gene ID: HRGMv2_2325_27_18
Type:
Location: 27813 - 29189 (-)
Type:
Location: 27813 - 29189 (-)
Gene ID: HRGMv2_2325_27_19
Type: CAZyme
Location: 29189 - 30421 (-)
Type: CAZyme
Location: 29189 - 30421 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus sp900753685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.