PROTEIN: HRGMv2_2325_27_18
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Protein File & Metadata
Source:
HRGMv2_2325_27_18.pdb
Genome ID:
Protein ID:
HRGMv2_2325_27_18
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Protein Sequence
MNNHKNYLDI LRRCSDSASF YQASIFMQEE ESDALKKDYE KHIIYKSVFS VVGPVMLSYV 60 LWVLREALKS GMKTLFFLAR DGKIMKELAE LLIEKYHLDF QCHYLYVSRY SLRKALFIVA 120 PEEIWEYLRR YSLKVTPELV LERSGLTKEV QQELLRDLGF QYPEQSTKLL TPKELIKFTN 180 MLQMSERFQN EMTQNALEQN QLIFQYFKEQ GLTTDQKALL VDSGWTGSMQ RCIRQLLSFN 240 GCTTMLEGYY FGIQSKTKKE DGFYHSFYFD YRDARRYVLF NNNLFECWCM ADHGMTVGYQ 300 KGLHGIVPVL KEASQNWHQE FQSDLLKMYT TYFMRFQENF FSVPFESLPQ LAEPLLVQFM 360 MYPNKDEAFV YGRIPFCDDT TEAYMQPLAA RLSRYDLFCN LTVVKSINKA LKFIRQLTIK 420 ESGWREGTIS LLPQPLALIM QMDSQISYAV KIIAAHIR 458
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 6 | 442 | 7 | 631 | 0.6531 |
0.7991 |
| AF-Q0P8I2-F1-model_v4 | 1 | 456 | 576 | 979 | 0.4808 |
0.7519 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A974WXG9 | GT4 | 1 | 450 | 187 | 1078 | 0.591 |
0.8515 |
| AF-W0DNV7-F1-model_v4 | GT2 | 8 | 458 | 635 | 1091 | 0.5813 |
0.8336 |
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 8 | 456 | 617 | 1067 | 0.58 |
0.8296 |
| AF-A0A0U5F758-F1-model_v4 | GT2 | 35 | 450 | 4 | 403 | 0.5735 |
0.7801 |
| A0A1I7GMF6 | GT2 | 8 | 454 | 633 | 1083 | 0.5706 |
0.8229 |
| V4JBH5 | GT2 | 38 | 457 | 1 | 657 | 0.5601 |
0.7724 |
| A0A9J7AXY3 | GT2 | 37 | 457 | 4 | 400 | 0.5572 |
0.7984 |
| QRK05458.1 | GT4 | 12 | 458 | 248 | 988 | 0.5506 |
0.8147 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 30 | 453 | 3 | 405 | 0.5495 |
0.7981 |
| AF-A0A1D7XMN6-F1-model_v4 | GT2 | 1 | 451 | 559 | 970 | 0.5395 |
0.8279 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A974WXG9 | GT4 | 1 | 450 | 187 | 1078 | 0.591 |
0.8515 |
| A0A2I6S8V6 | GT2 | 8 | 456 | 617 | 1067 | 0.58 |
0.8296 |
| A0A0U5F758 | GT2 | 35 | 450 | 4 | 403 | 0.5735 |
0.7801 |
| A0A1I7GMF6 | GT2 | 8 | 454 | 633 | 1083 | 0.5706 |
0.8229 |
| V4JBH5 | GT2 | 38 | 457 | 1 | 657 | 0.5601 |
0.7724 |
| A0A9J7AXY3 | GT2 | 37 | 457 | 4 | 400 | 0.5572 |
0.7984 |
| QRK05458.1 | GT4 | 12 | 458 | 248 | 988 | 0.5506 |
0.8147 |
| A0A0H3KC95 | GT2 | 30 | 453 | 3 | 405 | 0.5495 |
0.7981 |
| U5MZQ8 | GT2 | 1 | 449 | 559 | 967 | 0.5362 |
0.8291 |
| W8KPG0 | GT2 | 2 | 456 | 2 | 400 | 0.5347 |
0.7949 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 13 | 374 | 239 | 591 | 0.5918 |
0.86 |
| 8a0m-assembly1.cif.gz_B | 3 | 446 | 459 | 876 | 0.5581 |
0.8267 |
| 8a0m-assembly2.cif.gz_C | 2 | 446 | 592 | 1024 | 0.5506 |
0.8234 |
| 8a0c-assembly1.cif.gz_A | 3 | 446 | 597 | 1028 | 0.5505 |
0.8266 |
| 8a0m-assembly1.cif.gz_A | 2 | 446 | 591 | 1023 | 0.5503 |
0.823 |
| 8a0c-assembly1.cif.gz_B | 3 | 446 | 597 | 1025 | 0.5449 |
0.8227 |
| 8a0m-assembly2.cif.gz_D | 3 | 446 | 488 | 887 | 0.5302 |
0.8204 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.