Genome Details
Selected Rep_genome_ID: HRGMv2_2235
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900766575
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| GCA_021632675.1_ASM2163267v1_genomic | 2,962,399 | 97.47% | 2.03% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_2235 | 2,885,209 | 97.97% | 1.932% | Cameroon | Africa | HRGM |
| KY091_maxbin.011 | 3,197,955 | 98.32% | 3.34% | NA | Africa | H3AfricaPhase2 |
| MGYG000000583 | 2,865,631 | 96.04% | 1.93% | Madagascar | Africa | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2235_CGC3 | CGCFAM_00003 | Yes | 18 | 10 | |
| HRGMv2_2235_CGC4 | CGCFAM_00011 | Yes | 6 | 3 | |
| HRGMv2_2235_CGC30 | CGCFAM_00045 | Yes | 6 | 1 | alpha-glucan |
| HRGMv2_2235_CGC45 | CGCFAM_00114 | Yes | 3 | 1 | |
| HRGMv2_2235_CGC32 | CGCFAM_00168 | Yes | 11 | 4 | |
| HRGMv2_2235_CGC2 | CGCFAM_00366 | Yes | 7 | 2 | |
| HRGMv2_2235_CGC25 | CGCFAM_01016 | Yes | 15 | 5 | |
| HRGMv2_2235_CGC14 | CGCFAM_01573 | Yes | 11 | 2 | |
| HRGMv2_2235_CGC22 | CGCFAM_01676 | Yes | 5 | 1 | |
| HRGMv2_2235_CGC36 | CGCFAM_02129 | Yes | 8 | 1 | |
| HRGMv2_2235_CGC5 | CGCFAM_02675 | Yes | 5 | 1 | |
| HRGMv2_2235_CGC7 | CGCFAM_02844 | Yes | 11 | 2 | |
| HRGMv2_2235_CGC42 | CGCFAM_03387 | Yes | 5 | 1 | |
| HRGMv2_2235_CGC23 | CGCFAM_03866 | Yes | 9 | 1 | |
| HRGMv2_2235_CGC44 | CGCFAM_05113 | Yes | 3 | 1 | |
| HRGMv2_2235_CGC38 | CGCFAM_06111 | Yes | 6 | 1 | |
| HRGMv2_2235_CGC19 | CGCFAM_10000 | Yes | 19 | 8 |
Top CAZyme Families