Cluster: HRGMv2_2235_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2235
- CGC Family ID: CGCFAM_02675
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2235_2 | HRGMv2_2235_2_53 | 59474 | 61234 | - | 3.A.1.106.2 |
| TC | HRGMv2_2235_2 | HRGMv2_2235_2_54 | 61375 | 61836 | - | 9.B.34.1.2 |
| TC | HRGMv2_2235_2 | HRGMv2_2235_2_55 | 62157 | 63224 | + | 9.B.97.4.1 |
| pfam | HRGMv2_2235_2 | HRGMv2_2235_2_56 | 63472 | 64353 | - | DUF4368 |
| CAZyme | HRGMv2_2235_2 | HRGMv2_2235_2_57 | 65016 | 66332 | - | GH3 |
Gene ID: HRGMv2_2235_2_53
Type: TC
Location: 59474 - 61234 (-)
Type: TC
Location: 59474 - 61234 (-)
Gene ID: HRGMv2_2235_2_54
Type: TC
Location: 61375 - 61836 (-)
Type: TC
Location: 61375 - 61836 (-)
Gene ID: HRGMv2_2235_2_55
Type: TC
Location: 62157 - 63224 (+)
Type: TC
Location: 62157 - 63224 (+)
Gene ID: HRGMv2_2235_2_56
Type: pfam
Location: 63472 - 64353 (-)
Type: pfam
Location: 63472 - 64353 (-)
Gene ID: HRGMv2_2235_2_57
Type: CAZyme
Location: 65016 - 66332 (-)
Type: CAZyme
Location: 65016 - 66332 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900766575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.