dbCAN Logo

Cluster: HRGMv2_2235_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2235_20 HRGMv2_2235_20_10 9178 10320 - GH105
STP HRGMv2_2235_20 HRGMv2_2235_20_11 10475 12523 - HATPase_c | HisKA | Response_reg
STP HRGMv2_2235_20 HRGMv2_2235_20_12 12541 15408 - HATPase_c | HisKA | Response_reg
TC HRGMv2_2235_20 HRGMv2_2235_20_13 15527 16708 - 3.A.1.115.1
TC HRGMv2_2235_20 HRGMv2_2235_20_14 16698 17486 - 3.A.1.115.1
pfam HRGMv2_2235_20 HRGMv2_2235_20_15 17542 18372 - TraX
TC HRGMv2_2235_20 HRGMv2_2235_20_16 18523 19605 - 8.A.59.4.1
pfam HRGMv2_2235_20 HRGMv2_2235_20_17 19602 19958 - Hpt
TC HRGMv2_2235_20 HRGMv2_2235_20_18 19965 21896 - 8.A.59.4.1
Gene ID: HRGMv2_2235_20_10
Type: CAZyme
Location: 9178 - 10320 (-)
Gene ID: HRGMv2_2235_20_11
Type: STP
Location: 10475 - 12523 (-)
Gene ID: HRGMv2_2235_20_12
Type: STP
Location: 12541 - 15408 (-)
Gene ID: HRGMv2_2235_20_13
Type: TC
Location: 15527 - 16708 (-)
Gene ID: HRGMv2_2235_20_14
Type: TC
Location: 16698 - 17486 (-)
Gene ID: HRGMv2_2235_20_15
Type: pfam
Location: 17542 - 18372 (-)
Gene ID: HRGMv2_2235_20_16
Type: TC
Location: 18523 - 19605 (-)
Gene ID: HRGMv2_2235_20_17
Type: pfam
Location: 19602 - 19958 (-)
Gene ID: HRGMv2_2235_20_18
Type: TC
Location: 19965 - 21896 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List