Cluster: HRGMv2_2235_CGC45
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2235
- CGC Family ID: CGCFAM_00114
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2235_93 | HRGMv2_2235_93_2 | 2038 | 4374 | + | CBM48 | GH13_9 |
| TC | HRGMv2_2235_93 | HRGMv2_2235_93_3 | 4381 | 5232 | + | 1.A.23.2.1 |
| TC | HRGMv2_2235_93 | HRGMv2_2235_93_4 | 5325 | 6449 | + | 3.A.1.2.17 |
Gene ID: HRGMv2_2235_93_2
Type: CAZyme
Location: 2038 - 4374 (+)
Type: CAZyme
Location: 2038 - 4374 (+)
Gene ID: HRGMv2_2235_93_3
Type: TC
Location: 4381 - 5232 (+)
Type: TC
Location: 4381 - 5232 (+)
Gene ID: HRGMv2_2235_93_4
Type: TC
Location: 5325 - 6449 (+)
Type: TC
Location: 5325 - 6449 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor sp900766575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.