dbCAN Logo

Cluster: HRGMv2_2235_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2235_6 HRGMv2_2235_6_33 38281 46992 + CE8 | PL9_1
pfam HRGMv2_2235_6 HRGMv2_2235_6_34 47122 48111 - 2-Hacid_dh | 2-Hacid_dh_C
NULL(UNKNOWN) HRGMv2_2235_6 HRGMv2_2235_6_35 48273 49217 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2235_6 HRGMv2_2235_6_36 49355 51103 + 3.A.1.106.12
TC HRGMv2_2235_6 HRGMv2_2235_6_37 51100 52797 + 3.A.1.106.11
pfam HRGMv2_2235_6 HRGMv2_2235_6_38 52927 53274 + YgbA_NO
CAZyme HRGMv2_2235_6 HRGMv2_2235_6_39 53319 55754 - GH94
TF HRGMv2_2235_6 HRGMv2_2235_6_40 56247 57269 + LacI
NULL(UNKNOWN) HRGMv2_2235_6 HRGMv2_2235_6_41 57367 58779 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2235_6 HRGMv2_2235_6_42 58993 59907 + 3.A.1.1.4
TC HRGMv2_2235_6 HRGMv2_2235_6_43 59920 60786 + 3.A.1.1.48
Gene ID: HRGMv2_2235_6_33
Type: CAZyme
Location: 38281 - 46992 (+)
Gene ID: HRGMv2_2235_6_34
Type: pfam
Location: 47122 - 48111 (-)
Gene ID: HRGMv2_2235_6_35
Type:
Location: 48273 - 49217 (+)
Gene ID: HRGMv2_2235_6_36
Type: TC
Location: 49355 - 51103 (+)
Gene ID: HRGMv2_2235_6_37
Type: TC
Location: 51100 - 52797 (+)
Gene ID: HRGMv2_2235_6_38
Type: pfam
Location: 52927 - 53274 (+)
Gene ID: HRGMv2_2235_6_39
Type: CAZyme
Location: 53319 - 55754 (-)
Gene ID: HRGMv2_2235_6_40
Type: TF
Location: 56247 - 57269 (+)
Gene ID: HRGMv2_2235_6_41
Type:
Location: 57367 - 58779 (+)
Gene ID: HRGMv2_2235_6_42
Type: TC
Location: 58993 - 59907 (+)
Gene ID: HRGMv2_2235_6_43
Type: TC
Location: 59920 - 60786 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List