PROTEIN: HRGMv2_2235_6_41
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Protein File & Metadata
Source:
HRGMv2_2235_6_41.pdb
Genome ID:
Protein ID:
HRGMv2_2235_6_41
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Protein Sequence
MKKKVLSALL TTAMLASMLV GCGSSDTEAP AASTDAAPAA STEAAASTEA ASTEAAATDE 60 GKIFNIYCWN EEFKSRLTDH YPGYEEVDGT TGKIGDITVK WNITPSDDNA YQNNLDAALL 120 KQADAAADDK IDLFLIEADY ALKYVDTDYT MPVKDLGITD ADLANQYQYT KDVVTDSNGS 180 LKGVSWQGCP GVLIYNREAA KAVLGTDDPA EVQKAVADWD TFTATAEQMK AAGYNMVSSV 240 NDTYRVYSNN VSGKWVQDGK IVIDDNLMKW VDDSKKMVDA KETGTFDLWS DDWSKGFYPD 300 GKVFCYFGPA WLINFSMAAD TDGSIANQGG WGATEGPQGF FWGGTWICGA TGTDNPSLVK 360 DIILKMTTDE DIMKEIVVAD DDFVNNKPAM EAMAADTSYQ SKVLGGQNPL AMFCAGAEKI 420 DLSNLSAYDQ GCNEEFQHAM KNYFDGKASL DDALDLFYKA VEEKYPELTH 470
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F2E6-F1-model_v4 | 59 | 469 | 41 | 436 | 0.6987 |
0.8139 |
| AF-A0A133CDW9-F1-model_v4 | 60 | 469 | 43 | 443 | 0.6764 |
0.7827 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 7 | 468 | 269 | 866 | 0.5586 |
0.74 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 7 | 468 | 269 | 866 | 0.5586 |
0.74 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ixp-assembly1.cif.gz_A | 58 | 466 | 1 | 393 | 0.8044 |
0.8891 |
| 3uor-assembly2.cif.gz_B | 62 | 469 | 1 | 388 | 0.7507 |
0.8443 |
| 6x84-assembly2.cif.gz_B | 58 | 469 | 1 | 411 | 0.7406 |
0.8085 |
| 8bfy-assembly1.cif.gz_A | 62 | 467 | 1 | 393 | 0.7379 |
0.8219 |
| 4rk2-assembly1.cif.gz_A | 55 | 466 | 1 | 393 | 0.7343 |
0.8161 |
| 7vfq-assembly1.cif.gz_A | 61 | 470 | 1 | 394 | 0.7319 |
0.8135 |
| 7vfq-assembly2.cif.gz_B | 61 | 470 | 1 | 396 | 0.731 |
0.8105 |
| 7vfr-assembly1.cif.gz_A | 60 | 470 | 1 | 397 | 0.7304 |
0.809 |
| 2z8d-assembly2.cif.gz_B | 56 | 470 | 1 | 399 | 0.7293 |
0.8066 |
| 7vfq-assembly4.cif.gz_D | 61 | 470 | 1 | 397 | 0.7289 |
0.8075 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P29822-F1-model_v4 | 58 | 466 | 25 | 422 | 0.7476 |
0.8471 |
| AF-Q9KEE7-F1-model_v4 | 7 | 469 | 25 | 445 | 0.7269 |
0.8033 |
| AF-O31518-F1-model_v4 | 54 | 468 | 28 | 427 | 0.6882 |
0.7843 |
| AF-Q8YCA7-F1-model_v4 | 60 | 469 | 24 | 433 | 0.6777 |
0.7608 |
| AF-Q2YKR5-F1-model_v4 | 61 | 469 | 25 | 433 | 0.676 |
0.7609 |
| AF-D4GP35-F1-model_v4 | 14 | 470 | 16 | 459 | 0.6479 |
0.6981 |
| AF-P58300-F1-model_v4 | 41 | 468 | 43 | 434 | 0.6468 |
0.7582 |
| AF-O58758-F1-model_v4 | 55 | 468 | 42 | 420 | 0.6381 |
0.759 |
| AF-Q9V297-F1-model_v4 | 31 | 468 | 38 | 453 | 0.6351 |
0.72 |
| AF-Q02UB7-F1-model_v4 | 60 | 445 | 24 | 367 | 0.5844 |
0.7139 |