PROTEIN: HRGMv2_2235_6_35
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Protein File & Metadata
Source:
HRGMv2_2235_6_35.pdb
Genome ID:
Protein ID:
HRGMv2_2235_6_35
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Protein Sequence
MKKSVLATIL AGVMISCAAC GSQQTTVIPE VTGTAIEGTQ EASQESKTPE ATQETTQETT 60 QEAVNPSGEA TTGAVEITLE DREGSSAPDD KQRSYTYTYQ VPAITIPGNE EAQNKIQNDL 120 NAYVDGFVED ITNGDFGTIF EGESSGVQSY QNLTLNVVRA DDKVISLAWG NEGYDQGAHG 180 WYIVRYMNYY TQTGEEITFD SLGSGFREKA LELVTAKAAE MQASENCFFD DYEKNIKLVV 240 LDGTEDMNAI YKEIYGDLEG VEYDYGESTP TFCITKDGFT FESGQYVLQS YAVGIIDFDF 300 PASDFGTALT ADIF 314
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HUJ3-F1-model_v4 | 72 | 314 | 28 | 245 | 0.6093 |
0.783 |
| AF-A0A133CMR8-F1-model_v4 | 14 | 314 | 22 | 298 | 0.5873 |
0.6657 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A3T0KXR9-F1-model_v4 | CE4 | 52 | 314 | 1 | 246 | 0.4975 |
0.7544 |
| AF-A0A099HZZ8-F1-model_v4 | CE4 | 55 | 314 | 15 | 223 | 0.4895 |
0.8403 |
| AF-F2F9H8-F1-model_v4 | CE4 | 24 | 314 | 15 | 262 | 0.4872 |
0.73 |
| AF-A0A1C7HSI3-F1-model_v4 | CE4 | 52 | 313 | 3 | 222 | 0.4867 |
0.7963 |
| AF-A0A7H8YYL8-F1-model_v4 | CE4 | 28 | 314 | 1 | 233 | 0.4865 |
0.7573 |
| AF-A0A857VF65-F1-model_v4 | CE4 | 25 | 314 | 2 | 240 | 0.4861 |
0.7486 |
| AF-A0A857VG36-F1-model_v4 | CE4 | 27 | 314 | 5 | 241 | 0.4859 |
0.7476 |
| AF-A0A410WI89-F1-model_v4 | CE4 | 66 | 314 | 41 | 247 | 0.4846 |
0.8635 |
| AF-D4FVB2-F1-model_v4 | CE4 | 67 | 314 | 42 | 248 | 0.4842 |
0.8639 |
| AF-A0A6H0H0W5-F1-model_v4 | CE4 | 66 | 314 | 42 | 246 | 0.4841 |
0.8709 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A345HYK8 | CE4 | 2 | 314 | 13 | 269 | 0.4776 |
0.7147 |
| U6SKR9 | CE4 | 25 | 314 | 14 | 257 | 0.4768 |
0.7341 |
| M5R022 | CE4 | 67 | 314 | 47 | 252 | 0.4745 |
0.8551 |
| A0A5J6SIX8 | CE4 | 25 | 314 | 18 | 269 | 0.4728 |
0.7108 |
| A0A6M6DTT2 | CE4 | 61 | 314 | 12 | 245 | 0.4718 |
0.7503 |
| QUG42504.1 | CE4 | 12 | 314 | 1 | 266 | 0.4712 |
0.677 |
| A0A0A3IZ08 | CE4 | 67 | 314 | 77 | 287 | 0.4677 |
0.8269 |
| A0A6I6UF14 | CE4 | 55 | 314 | 24 | 237 | 0.4675 |
0.7884 |
| A0A161JB51 | CE4 | 67 | 314 | 41 | 252 | 0.467 |
0.8134 |
| A0A4V2KLV4 | CE4 | 67 | 314 | 60 | 266 | 0.4668 |
0.8271 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3cyg-assembly2.cif.gz_A | 71 | 314 | 1 | 210 | 0.6881 |
0.8523 |
| 3cyg-assembly3.cif.gz_B | 72 | 309 | 1 | 194 | 0.6793 |
0.858 |
| 5jen-assembly2.cif.gz_C | 73 | 314 | 1 | 204 | 0.6545 |
0.8137 |
| 5jen-assembly1.cif.gz_A | 73 | 314 | 1 | 209 | 0.6529 |
0.8041 |
| 4e72-assembly1.cif.gz_A | 72 | 314 | 3 | 216 | 0.6475 |
0.7936 |
| 3s5t-assembly1.cif.gz_A-2 | 71 | 314 | 2 | 250 | 0.6353 |
0.7448 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O05403-F1-model_v4 | 67 | 314 | 46 | 284 | 0.57 |
0.7206 |
| AF-O34798-F1-model_v4 | 66 | 314 | 42 | 248 | 0.4827 |
0.8607 |