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Cluster: HRGMv2_2235_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2235_3 HRGMv2_2235_3_82 93926 95071 + GH25
pfam HRGMv2_2235_3 HRGMv2_2235_3_83 95080 95589 - 4HBT
TC HRGMv2_2235_3 HRGMv2_2235_3_84 95843 96322 + 9.A.11.1.1
pfam HRGMv2_2235_3 HRGMv2_2235_3_85 96349 96975 + SporV_AA
NULL(UNKNOWN) HRGMv2_2235_3 HRGMv2_2235_3_86 97126 97230 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2235_3 HRGMv2_2235_3_87 97318 97839 + 9.A.11.1.1
pfam HRGMv2_2235_3 HRGMv2_2235_3_88 98042 99103 + Fe-ADH | Fe-ADH_2
TF HRGMv2_2235_3 HRGMv2_2235_3_89 99227 99742 + MarR
TC HRGMv2_2235_3 HRGMv2_2235_3_90 99775 101529 + 3.A.1.135.5
TC HRGMv2_2235_3 HRGMv2_2235_3_91 101529 103454 + 3.A.1.135.5
CAZyme HRGMv2_2235_3 HRGMv2_2235_3_92 103583 106864 - GT39
Gene ID: HRGMv2_2235_3_82
Type: CAZyme
Location: 93926 - 95071 (+)
Gene ID: HRGMv2_2235_3_83
Type: pfam
Location: 95080 - 95589 (-)
Gene ID: HRGMv2_2235_3_84
Type: TC
Location: 95843 - 96322 (+)
Gene ID: HRGMv2_2235_3_85
Type: pfam
Location: 96349 - 96975 (+)
Gene ID: HRGMv2_2235_3_86
Type:
Location: 97126 - 97230 (+)
Gene ID: HRGMv2_2235_3_87
Type: TC
Location: 97318 - 97839 (+)
Gene ID: HRGMv2_2235_3_88
Type: pfam
Location: 98042 - 99103 (+)
Gene ID: HRGMv2_2235_3_89
Type: TF
Location: 99227 - 99742 (+)
Gene ID: HRGMv2_2235_3_90
Type: TC
Location: 99775 - 101529 (+)
Gene ID: HRGMv2_2235_3_91
Type: TC
Location: 101529 - 103454 (+)
Gene ID: HRGMv2_2235_3_92
Type: CAZyme
Location: 103583 - 106864 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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