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Genome Details

Selected Rep_genome_ID: HRGMv2_0830
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Clostridiales
→
Family
Clostridiaceae
→
Genus
Clostridium
→
Species
Clostridium saudiense
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
AG405_maxbin.016_sub 3,632,495 99.03% 2.86% NA Africa H3AfricaPhase2
CGMR012629 3,272,015 95.4% 1.16% China Asia CGMR
HRGMv2_0830 3,681,250 97.98% 0.896% Japan Asia HRGM
SPMP08_bin.79 3,754,329 95.62% 1.61% Singapore Asia SPMP
SPMP68_bin.53 3,816,841 96.96% 2.02% Singapore Asia SPMP
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0830_CGC35 CGCFAM_00020 Yes 5 1 host glycan/beta-glucan
HRGMv2_0830_CGC7 CGCFAM_00020 Yes 5 1 host glycan/beta-glucan
HRGMv2_0830_CGC9 CGCFAM_00020 Yes 7 2 host glycan/beta-glucan
HRGMv2_0830_CGC46 CGCFAM_00027 Yes 7 1
HRGMv2_0830_CGC37 CGCFAM_00035 Yes 10 2 fructan
HRGMv2_0830_CGC25 CGCFAM_00042 Yes 5 2 beta-glucan
HRGMv2_0830_CGC51 CGCFAM_00160 Yes 6 2 alpha-glucan
HRGMv2_0830_CGC2 CGCFAM_00162 Yes 6 2
HRGMv2_0830_CGC31 CGCFAM_00195 Yes 5 2
HRGMv2_0830_CGC32 CGCFAM_00344 Yes 4 1
HRGMv2_0830_CGC52 CGCFAM_00351 Yes 3 1
HRGMv2_0830_CGC44 CGCFAM_00389 Yes 4 2
HRGMv2_0830_CGC54 CGCFAM_00658 Yes 19 11
HRGMv2_0830_CGC19 CGCFAM_00736 Yes 10 3
HRGMv2_0830_CGC36 CGCFAM_00854 Yes 7 1
HRGMv2_0830_CGC11 CGCFAM_01057 Yes 9 4
HRGMv2_0830_CGC49 CGCFAM_01215 Yes 5 1
HRGMv2_0830_CGC22 CGCFAM_01490 Yes 3 2 beta-mannan
HRGMv2_0830_CGC27 CGCFAM_01807 Yes 7 3
HRGMv2_0830_CGC15 CGCFAM_02074 Yes 8 1
HRGMv2_0830_CGC20 CGCFAM_02256 Yes 11 2
HRGMv2_0830_CGC10 CGCFAM_02495 Yes 6 1
HRGMv2_0830_CGC58 CGCFAM_02599 Yes 3 1
HRGMv2_0830_CGC8 CGCFAM_03035 Yes 5 2
HRGMv2_0830_CGC60 CGCFAM_03132 Yes 4 1
Top CAZyme Families